STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6TZ23_CIOINWD_REPEATS_REGION domain-containing protein. (649 aa)    
Predicted Functional Partners:
LOC101243169
Mitotic-spindle organizing protein 2B-like.
    
 0.930
LOC100180749
Gamma-tubulin complex component.
    
 0.874
H2XNL6_CIOIN
Gamma-tubulin complex component.
    
 0.872
LOC100187279
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
    
 0.809
F6UFE4_CIOIN
Gamma-tubulin complex component.
    
 0.808
F6Q476_CIOIN
HAUS6_N domain-containing protein.
   
 0.792
F6WIL6_CIOIN
Gamma-tubulin complex component.
    
 0.762
F6XLX0_CIOIN
Uncharacterized protein.
    
 0.738
ci-ndk/dm44
Radial spoke protein NDK/DM44; Belongs to the NDK family.
    
 0.737
F6S1D4_CIOIN
Gamma-tubulin complex component.
   
 0.731
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.