STRINGSTRING
ENSCING00000004855 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000004855" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000004855Uncharacterized protein (975 aa)    
Predicted Functional Partners:
Cin.19146
Uncharacterized protein ; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (161 aa)
     
  0.774
ENSCING00000008998
Uncharacterized protein (331 aa)
     
  0.603
ENSCING00000022721
Uncharacterized protein (104 aa)
       
  0.594
ENSCING00000002955
Uncharacterized protein (707 aa)
     
  0.583
cul4a
Uncharacterized protein (614 aa)
     
  0.581
ENSCING00000001372
Uncharacterized protein (100 aa)
       
  0.563
ENSCING00000006306
40S ribosomal protein S8 (205 aa)
       
      0.561
ENSCING00000005628
Uncharacterized protein (714 aa)
       
      0.561
nat10
Uncharacterized protein (956 aa)
       
      0.561
ENSCING00000007494
Uncharacterized protein (862 aa)
     
  0.538
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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