Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F6SPL0_CIOINUncharacterized protein. (503 aa)    
Predicted Functional Partners:
LOC100185647
Uncharacterized protein.
  
  
 
0.900
F6UGD7_CIOIN
Uncharacterized protein.
   
   0.819
F6SQ65_CIOIN
Uncharacterized protein.
   
  
 0.598
Mitf
BHLH domain-containing protein.
   
 0.598
H2XNY7_CIOIN
Uncharacterized protein.
   
  
 0.598
F6T9V7_CIOIN
B30.2/SPRY domain-containing protein.
  
 
  0.481
H2Y2I8_CIOIN
Uncharacterized protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.463
H2Y0J4_CIOIN
Uncharacterized protein.
  
 
  0.449
F6R7P6_CIOIN
MACPF domain-containing protein.
  
  
  0.425
LOC100178266
Uncharacterized protein.
      
 0.424
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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