STRINGSTRING
ENSCING00000004877 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000004877" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000004877Uncharacterized protein ; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs (164 aa)    
Predicted Functional Partners:
ENSCING00000002708
Uncharacterized protein (147 aa)
     
  0.999
ENSCING00000022087
Uncharacterized protein (394 aa)
       
  0.997
eif4a3
Uncharacterized protein (410 aa)
     
  0.996
ENSCING00000006448
Uncharacterized protein (209 aa)
     
  0.996
ENSCING00000010780
Uncharacterized protein (430 aa)
     
  0.971
ENSCING00000008396
Uncharacterized protein (197 aa)
     
  0.953
ENSCING00000016317
Uncharacterized protein (196 aa)
   
  0.916
bat1
Uncharacterized protein (427 aa)
     
  0.885
upf1
Uncharacterized protein (836 aa)
     
  0.881
ddx5
Uncharacterized protein (572 aa)
     
  0.874
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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