STRINGSTRING
atg9a protein (Ciona intestinalis) - STRING interaction network
"atg9a" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atg9aUncharacterized protein (737 aa)    
Predicted Functional Partners:
ENSCING00000009608
Uncharacterized protein (127 aa)
     
  0.884
ENSCING00000004244
Uncharacterized protein (446 aa)
     
 
  0.876
ENSCING00000023409
Uncharacterized protein (98 aa)
     
 
  0.865
pik3r4
Uncharacterized protein (1337 aa)
     
 
  0.838
ENSCING00000003389
Uncharacterized protein (931 aa)
     
  0.835
ENSCING00000024773
Uncharacterized protein (512 aa)
     
 
  0.756
ENSCING00000004841
Uncharacterized protein (678 aa)
     
 
  0.746
ENSCING00000002496
Uncharacterized protein (462 aa)
     
 
  0.735
ENSCING00000007928
Uncharacterized protein (772 aa)
     
 
  0.704
ENSCING00000003090
Uncharacterized protein (287 aa)
     
 
  0.704
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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