Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100179675Threonine synthase-like 2. (474 aa)    
Predicted Functional Partners:
LOC100178245
Uncharacterized protein.
  
 0.873
F6UET6_CIOIN
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
  
 0.840
LOC100176927
Serine racemase-like.
  
 
 0.770
LOC100178137
Uncharacterized protein LOC100178137.
  
 
 0.770
F6QJB5_CIOIN
HD domain-containing protein.
    
 0.752
F6Z7L9_CIOIN
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.752
F6XI02_CIOIN
U-box domain-containing protein.
      
 0.747
Zf(c2h2)-76
Uncharacterized protein.
      
 0.713
H2XNN8_CIOIN
PALP domain-containing protein.
  
 
 0.706
LOC100178583
Tyrosine--tRNA ligase.
  
  
 0.673
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.