STRINGSTRING
ENSCING00000004978 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000004978" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000004978Uncharacterized protein (577 aa)    
Predicted Functional Partners:
ENSCING00000022206
Uncharacterized protein (486 aa)
     
    0.905
ENSCING00000024924
Uncharacterized protein (112 aa)
     
    0.789
ENSCING00000019773
Uncharacterized protein (209 aa)
     
    0.789
ENSCING00000018389
Uncharacterized protein (175 aa)
     
    0.789
snrnp200
Uncharacterized protein (2140 aa)
     
    0.789
stip
Sip1/TFIP11 interacting protein (832 aa)
     
    0.779
ddx23
Uncharacterized protein (779 aa)
     
    0.726
ENSCING00000006509
Uncharacterized protein (351 aa)
       
    0.717
dhx35
Uncharacterized protein (661 aa)
     
  0.649
ENSCING00000005362
Uncharacterized protein (352 aa)
         
  0.619
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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