Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100185083AH receptor-interacting protein isoform X2. (336 aa)    
Predicted Functional Partners:
Ahr
Uncharacterized protein.
    
 0.915
F6WSZ7_CIOIN
Uncharacterized protein.
    
 
 0.885
F6YNJ1_CIOIN
HATPase_c domain-containing protein.
    
 0.858
LOC100183146
Uncharacterized protein.
      
 0.810
LOC100184120
CS domain-containing protein.
    
 0.722
zf(ubr)-2
Zinc finger protein.
    
 
 0.675
F6VSQ8_CIOIN
Med12 domain-containing protein.
      
 0.670
H2XP59_CIOIN
Uncharacterized protein.
      
 0.657
LOC100182536
Melatonin receptor type 1A-like isoform X2.
   
  
 0.649
LOC100181821
Cyclin-dependent kinase 9; Belongs to the protein kinase superfamily.
    
   0.638
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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