Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
F6WLA0_CIOINNAD(P)-bd_dom domain-containing protein. (375 aa)    
Predicted Functional Partners:
LOC100180068
GDP-L-fucose synthase.
 0.997
LOC100183658
NTP_transferase domain-containing protein.
    
 0.994
F6R265_CIOIN
Epimerase domain-containing protein.
 
 0.993
F6UD77_CIOIN
ANK_REP_REGION domain-containing protein.
    
 
 0.964
F6TC27_CIOIN
NTP_transferase domain-containing protein.
    
 0.958
F6Q0G0_CIOIN
NTP_transferase domain-containing protein.
    
 0.958
H2XYX1_CIOIN
Uncharacterized protein.
  
 0.887
LOC100180591
Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
  
 
 0.865
F6W713_CIOIN
Glycos_transf_1 domain-containing protein.
  
 
 0.849
H2XT72_CIOIN
Fucokinase domain-containing protein.
   
  
 0.834
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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