STRINGSTRING
march6 protein (Ciona intestinalis) - STRING interaction network
"march6" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
march6Uncharacterized protein (887 aa)    
Predicted Functional Partners:
ENSCING00000007488
Uncharacterized protein (165 aa)
       
  0.911
ENSCING00000015372
Uncharacterized protein (533 aa)
     
  0.909
ENSCING00000007091
Uncharacterized protein (811 aa)
     
  0.863
ENSCING00000005214
Uncharacterized protein (225 aa)
     
  0.863
ENSCING00000020815
Uncharacterized protein (347 aa)
     
  0.843
ENSCING00000007605
Uncharacterized protein (381 aa)
     
  0.843
ENSCING00000012422
Uncharacterized protein (505 aa)
     
 
  0.823
ENSCING00000015969
Uncharacterized protein ; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (267 aa)
       
  0.797
ENSCING00000007440
Uncharacterized protein (313 aa)
       
  0.773
ENSCING00000024111
Uncharacterized protein (315 aa)
     
  0.741
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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