Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F7A4Y2_CIOINUncharacterized protein. (591 aa)    
Predicted Functional Partners:
LOC100184124
cGMP-dependent protein kinase.
  
  
 
0.903
H2XY43_CIOIN
Uncharacterized protein.
 
 
   0.558
H2XLB3_CIOIN
Uncharacterized protein.
 
   
  0.536
LOC100183853
6-pyruvoyl tetrahydrobiopterin synthase-like.
   
  0.496
H2XXC7_CIOIN
Phorbol-ester/DAG-type domain-containing protein.
 
   
  0.477
LOC100176009
cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily.
   
 0.418
LOC100186854
THAP domain-containing protein 1-like.
   
 0.418
H2XXD3_CIOIN
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 0.418
F6YAH3_CIOIN
Uncharacterized protein.
    
  0.416
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.