STRINGSTRING
xbpa protein (Ciona intestinalis) - STRING interaction network
"xbpa" - Transcription factor protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xbpaTranscription factor protein (309 aa)    
Predicted Functional Partners:
creb/atf-d
Uncharacterized protein (408 aa)
       
 
  0.685
ENSCING00000009590
Uncharacterized protein (659 aa)
     
   
  0.668
Cin.36228
Uncharacterized protein (240 aa)
           
  0.595
LOC494391
Uncharacterized protein (1026 aa)
           
  0.577
ENSCING00000019934
Uncharacterized protein (169 aa)
           
  0.525
ENSCING00000013424
Uncharacterized protein (332 aa)
           
  0.525
ENSCING00000002816
Uncharacterized protein (1124 aa)
           
  0.525
ENSCING00000009361
Uncharacterized protein (501 aa)
     
   
  0.518
ENSCING00000009665
Uncharacterized protein (664 aa)
     
   
  0.506
ENSCING00000007292
Uncharacterized protein (722 aa)
     
   
  0.480
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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