Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
F6ZM46_CIOINProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (294 aa)    
Predicted Functional Partners:
F6XTZ0_CIOIN
RRM domain-containing protein.
      
 0.540
ciic3
Thioredoxin domain-containing protein 3 homolog; May be required during the final stages of sperm tail maturation. May act by reducing disulfide bonds within the sperm components (By similarity).
    
 
 0.538
F7A8B4_CIOIN
Uncharacterized protein.
    
 0.530
F7A801_CIOIN
Uncharacterized protein.
    
 0.530
F6R4F4_CIOIN
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
    
 
 0.523
erk3/4
Protein kinase domain-containing protein.
  
 
 0.519
LOC100185873-2
Centromere protein S-like isoform X2.
      
 0.509
LOC113474404
COP9 signalosome complex subunit 7a-like.
      
 0.507
F7BEA7_CIOIN
Uncharacterized protein.
    
 
 0.497
LOC100185744
Protein tyrosine phosphatase type IVA 3.
      
 0.492
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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