Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F6Z2U1_CIOINUncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1109 aa)    
Predicted Functional Partners:
F6VW31_CIOIN
Uncharacterized protein.
   
 
 0.861
F6XCT9_CIOIN
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.772
H2XWH9_CIOIN
Protein kinase domain-containing protein.
   
 
 0.736
LOC100185658
Kinetochore protein NDC80 homolog.
   
  
 0.735
LOC100176140
KN motif and ankyrin repeat domain-containing protein 1-like isoform X1.
    
 
 0.730
LOC100187303
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.727
F6X972_CIOIN
Uncharacterized protein.
   
  
 0.725
LOC100187291
Uncharacterized protein LOC100187291.
   
  
 0.714
F6UYY4_CIOIN
INCENP_ARK-bind domain-containing protein.
   
  
 0.713
F6RC10_CIOIN
Uncharacterized protein.
   
  
 0.660
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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