Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F6WKV2_CIOINUncharacterized protein. (1385 aa)    
Predicted Functional Partners:
F6W2N4_CIOIN
Uncharacterized protein.
    
 0.955
F6R9A6_CIOIN
Uncharacterized protein.
    
 0.955
H2XJZ0_CIOIN
Guanylate kinase-like domain-containing protein.
    
 0.955
H2XQB4_CIOIN
COesterase domain-containing protein.
   
 0.919
H2XK45_CIOIN
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.826
F6PLQ2_CIOIN
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.773
LOC100179311
MAGUK p55 subfamily member 6-like; Belongs to the MAGUK family.
    
 0.756
F6UCG0_CIOIN
DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
      
 0.742
LOC619278
Uncharacterized protein.
      
 0.735
F6Z3V6_CIOIN
Uncharacterized protein.
      
 0.732
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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