STRINGSTRING
Cin.27617 protein (Ciona intestinalis) - STRING interaction network
"Cin.27617" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.27617Uncharacterized protein (535 aa)    
Predicted Functional Partners:
ENSCING00000007544
Uncharacterized protein (1596 aa)
   
  0.999
ENSCING00000012827
Uncharacterized protein (287 aa)
   
  0.999
ENSCING00000009130
Uncharacterized protein (772 aa)
   
  0.996
mars
Uncharacterized protein (664 aa)
 
  0.994
ENSCING00000002567
Uncharacterized protein (497 aa)
   
  0.992
ENSCING00000005183
Uncharacterized protein (551 aa)
 
  0.984
iars
Uncharacterized protein (996 aa)
   
  0.980
ENSCING00000002621
Uncharacterized protein (547 aa)
   
  0.972
ENSCING00000014497
Uncharacterized protein (140 aa)
   
  0.970
ENSCING00000007294
Uncharacterized protein (673 aa)
   
  0.970
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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