STRINGSTRING
lama5 protein (Ciona intestinalis) - STRING interaction network
"lama5" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lama5Uncharacterized protein (3767 aa)    
Predicted Functional Partners:
ENSCING00000013582
Uncharacterized protein (1045 aa)
         
  0.902
ENSCING00000022932
Uncharacterized protein (124 aa)
         
    0.800
ENSCING00000003358
Uncharacterized protein (393 aa)
         
    0.800
Cin.34217
Uncharacterized protein (227 aa)
         
    0.800
ENSCING00000006419
Uncharacterized protein (871 aa)
         
  0.529
ENSCING00000022078
Uncharacterized protein (1201 aa)
         
  0.526
ENSCING00000020353
Uncharacterized protein (402 aa)
         
  0.407
lamb1
Uncharacterized protein (1602 aa)
     
 
 
0.406
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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