STRINGSTRING
actl6b protein (Ciona intestinalis) - STRING interaction network
"actl6b" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
actl6bUncharacterized protein (423 aa)    
Predicted Functional Partners:
ENSCING00000009008
Uncharacterized protein (387 aa)
     
  0.987
ENSCING00000004824
Uncharacterized protein (456 aa)
     
  0.987
ENSCING00000013288
Uncharacterized protein (435 aa)
     
  0.984
smarcc2
Uncharacterized protein (639 aa)
     
  0.984
ENSCING00000004687
Uncharacterized protein (1214 aa)
     
  0.978
ENSCING00000004658
Uncharacterized protein (467 aa)
     
  0.969
ENSCING00000009221
Uncharacterized protein (572 aa)
     
  0.957
trrap
Uncharacterized protein (2944 aa)
       
  0.953
ENSCING00000019090
Uncharacterized protein (303 aa)
       
  0.952
ENSCING00000010516
Uncharacterized protein (228 aa)
     
  0.945
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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