Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
F6XVE4_CIOINPolypeptide N-acetylgalactosaminyltransferase. (498 aa)    
Predicted Functional Partners:
H2XKR8_CIOIN
Uncharacterized protein.
     
 0.926
H2XXB3_CIOIN
Uncharacterized protein.
      
 0.540
LOC100179723
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.499
F6Q2H6_CIOIN
Uncharacterized protein.
      
 0.488
LOC100178081
Ras-related protein Rab-6A.
     
  0.485
F6R6G1_CIOIN
Polypeptide N-acetylgalactosaminyltransferase.
    
  0.461
F6ZTS6_CIOIN
Uncharacterized protein; Belongs to the actin family.
     
  0.430
LOC100180096
Dynactin subunit 4 isoform X2.
     
  0.430
LOC100180245
Dynactin subunit 6-like.
     
  0.430
LOC100180225
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes.
     
  0.430
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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