Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Zf(cxxc)-5Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1257 aa)    
Predicted Functional Partners:
Uhrf2
Uncharacterized protein.
  
 0.995
F6WQW9_CIOIN
Uncharacterized protein.
   
 0.982
LOC100184693
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 
 0.980
F6YGJ7_CIOIN
Uncharacterized protein; Belongs to the peptidase C19 family.
   
 
 0.962
LOC100184540
Death domain-associated protein 6-like isoform X1.
    
 
 0.932
r27a
R27a protein isoform X1.
    
 
 0.928
LOC100184688
Adenosylhomocysteinase; Belongs to the adenosylhomocysteinase family.
   
 
 0.917
LOC100185384
ubiquitin-60S ribosomal protein L40.
    
 
 0.913
F6SNC6_CIOIN
AdoHcyase_NAD domain-containing protein; Belongs to the adenosylhomocysteinase family.
     
 0.912
F6ZJN8_CIOIN
Uncharacterized protein.
    
 
 0.910
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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