Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F6V8W5_CIOINUncharacterized protein. (228 aa)    
Predicted Functional Partners:
H2XQR8_CIOIN
Uncharacterized protein.
    
 
 0.844
H2XSN5_CIOIN
Uncharacterized protein.
    
 
 0.703
F6PRB6_CIOIN
TPR_REGION domain-containing protein.
    
 
 0.637
F6U1V3_CIOIN
Uncharacterized protein.
      
 0.630
H2XXZ6_CIOIN
SH3 domain-containing protein.
    
 
 0.549
LOC100179672
Serine/threonine-protein kinase Nek7-like; Belongs to the protein kinase superfamily.
    
 0.469
F6YJE0_CIOIN
Uncharacterized protein.
    
 
 0.436
H2Y0K6_CIOIN
Uncharacterized protein.
      
 0.426
F6R7B5_CIOIN
C2 domain-containing protein.
    
 
 0.419
F6Y1T4_CIOIN
Uncharacterized protein.
      
 0.410
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.