STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F7BPC9_CIOINUncharacterized protein. (241 aa)    
Predicted Functional Partners:
F6YRL7_CIOIN
Uncharacterized protein.
    
   0.736
LOC100179127
Phosphatidylserine synthase 1-like.
      
 0.694
F7ATG5_CIOIN
Uncharacterized protein.
      
 0.661
H2XZT6_CIOIN
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
  
 0.593
H2XJN3_CIOIN
N-acetyltransferase domain-containing protein.
      
 0.543
F6VKC0_CIOIN
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
      
 0.540
LOC100181974
WD repeat-containing protein 6-like.
      
 0.508
F7A7B2_CIOIN
Uncharacterized protein.
      
 0.508
LOC100177554
Oxidoreductase NAD-binding domain-containing protein 1-like isoform X1.
      
 0.422
F6U2S1_CIOIN
Uncharacterized protein.
    
   0.414
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (20%) [HD]