Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
Experiments
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[Homology]
Score
F7B690_CIOINCAP-Gly domain-containing protein. (1092 aa)    
Predicted Functional Partners:
LOC100177191
Uncharacterized protein LOC100177191.
   
 0.997
LOC100180096
Dynactin subunit 4 isoform X2.
    
 0.992
F7BML6_CIOIN
WD_REPEATS_REGION domain-containing protein.
    
 0.990
F7APT3_CIOIN
Uncharacterized protein.
    
 0.988
F6TVZ8_CIOIN
Uncharacterized protein; Belongs to the actin family.
   
 0.987
F6ZTS6_CIOIN
Uncharacterized protein; Belongs to the actin family.
    
 0.986
LOC100180245
Dynactin subunit 6-like.
    
 0.986
F6UI30_CIOIN
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
   
 0.980
LOC100180225
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes.
    
 0.974
LOC100184412
Uncharacterized protein.
    
 0.963
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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