STRINGSTRING
ipo9 protein (Ciona intestinalis) - STRING interaction network
"ipo9" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ipo9Uncharacterized protein (1011 aa)    
Predicted Functional Partners:
ENSCING00000008844
Uncharacterized protein (385 aa)
     
 
  0.941
ipo7
Uncharacterized protein (1067 aa)
     
 
  0.866
ipo5
Uncharacterized protein (1110 aa)
     
 
  0.827
tnpo1
Uncharacterized protein (756 aa)
     
 
  0.754
ENSCING00000024929
Importin subunit alpha (527 aa)
     
 
  0.748
ENSCING00000008979
Importin subunit alpha (529 aa)
     
 
  0.748
ENSCING00000008816
Importin subunit alpha (519 aa)
     
 
  0.748
pf16
Pf16 protein (425 aa)
     
 
  0.742
ENSCING00000023881
Uncharacterized protein (171 aa)
     
 
  0.742
ENSCING00000005798
Histone H2A (128 aa)
       
 
  0.734
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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