Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
F7ALR4_CIOINAmino_oxidase domain-containing protein. (499 aa)    
Predicted Functional Partners:
F6V176_CIOIN
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
  0.912
LOC100183543
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
  0.912
LOC100177170
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
  0.912
LOC100182970
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
  0.912
F6X2H2_CIOIN
Uncharacterized protein.
     
  0.900
LOC100185960
Beta-1,4-galactosyltransferase 1.
     
  0.900
F7AB40_CIOIN
Uncharacterized protein.
     
  0.900
F7A738_CIOIN
Uncharacterized protein.
     
  0.900
F6YLK0_CIOIN
Uncharacterized protein.
     
  0.900
LOC100179743
GLF domain-containing protein.
     
  0.900
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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