Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F7BFC8_CIOINCyclic nucleotide-binding domain-containing protein. (322 aa)    
Predicted Functional Partners:
F6TAP2_CIOIN
Cyclic nucleotide-binding domain-containing protein.
   
 0.762
F6YHV1_CIOIN
Cyclic nucleotide-binding domain-containing protein.
   
 0.762
Ciarr
Arrestin_C domain-containing protein.
   
  
 0.569
F6VR97_CIOIN
Ion_trans domain-containing protein.
  
 0.560
H2Y2I8_CIOIN
Uncharacterized protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.543
rel1
Rel1 protein isoform X1.
      
 0.495
F6Q8U3_CIOIN
Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
     
  0.485
F6TUU8_CIOIN
Uncharacterized protein.
     
  0.485
F6WWH2_CIOIN
PH domain-containing protein.
     
  0.485
F6WWX5_CIOIN
Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
     
  0.485
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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