Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
F6Y4K6_CIOINCation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1172 aa)    
Predicted Functional Partners:
H2XJV8_CIOIN
Uncharacterized protein.
    
 
 0.825
LOC100177708
EMC1_C domain-containing protein.
   
 
 0.806
LOC100176507
Synaptobrevin homolog YKT6-like isoform X2; Belongs to the synaptobrevin family.
 
 
    0.752
LOC100182231
Phosphoglycerate kinase.
    
 
 0.733
LOC100178515
Probable signal peptidase complex subunit 2.
   
   0.732
LOC100179323
J domain-containing protein.
   
 
 0.705
F6UA18_CIOIN
TPR_REGION domain-containing protein.
   
 
 0.695
F6T1Y9_CIOIN
Uncharacterized protein.
      
 0.672
F6QAT1_CIOIN
Uncharacterized protein.
      
 0.654
H2XXY9_CIOIN
Uncharacterized protein.
      
 0.652
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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