STRINGSTRING
atp13a1 protein (Ciona intestinalis) - STRING interaction network
"atp13a1" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atp13a1Uncharacterized protein (1172 aa)    
Predicted Functional Partners:
ENSCING00000007867
Uncharacterized protein (307 aa)
     
  0.774
atp7b
Uncharacterized protein (1408 aa)
   
  0.700
ENSCING00000022592
Uncharacterized protein (158 aa)
     
 
  0.668
ENSCING00000007504
Uncharacterized protein (660 aa)
   
  0.595
ENSCING00000018258
Uncharacterized protein (118 aa)
           
  0.570
atp8b2
Uncharacterized protein (1121 aa)
     
 
  0.491
dnajc10
Uncharacterized protein (817 aa)
   
 
  0.490
ENSCING00000002850
Uncharacterized protein (2241 aa)
   
 
  0.486
ENSCING00000014028
Uncharacterized protein (350 aa)
     
 
  0.485
ENSCING00000001739
Uncharacterized protein ; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1635 aa)
     
 
  0.485
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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