Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
LOC100177703Myelin P2 protein-like; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (136 aa)    
Predicted Functional Partners:
LOC100178903
Fatty acid-binding protein, liver-like.
  
 
 0.797
coup
Nuclear receptor.
    
 0.612
F6SU61_CIOIN
Uncharacterized protein.
      
 0.546
LOC100176701
Elongation of very long chain fatty acids protein.
   
  
 0.531
H2XSN3_CIOIN
Pyruvate carboxyltransferase domain-containing protein.
    
 
 0.527
ppar
Nuclear receptor.
    
 0.524
F6U1L2_CIOIN
Uncharacterized protein.
     
 0.510
rxr
Nuclear receptor.
   
 0.497
F6T0F1_CIOIN
Uncharacterized protein.
      
 0.494
F6S4F7_CIOIN
Non-specific serine/threonine protein kinase.
      
 0.493
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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