STRINGSTRING
rps6ka3 protein (Ciona intestinalis) - STRING interaction network
"rps6ka3" - Ribosomal protein S6 kinase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps6ka3Ribosomal protein S6 kinase (730 aa)    
Predicted Functional Partners:
ENSCING00000007183
Uncharacterized protein (1434 aa)
     
  0.977
ENSCING00000012576
Uncharacterized protein (666 aa)
       
  0.976
ENSCING00000004555
Uncharacterized protein (949 aa)
     
  0.975
erk1/2
Mitogen-activated protein kinase (350 aa)
     
0.975
Cin.18922
40S ribosomal protein S6 (248 aa)
       
  0.961
ENSCING00000020418
Uncharacterized protein (361 aa)
     
  0.959
ENSCING00000019078
Uncharacterized protein (265 aa)
     
  0.959
ENSCING00000018244
Uncharacterized protein (187 aa)
     
  0.959
ENSCING00000001460
Uncharacterized protein (754 aa)
     
  0.959
ENSCING00000007074
Uncharacterized protein (505 aa)
     
0.945
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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