STRINGSTRING
ENSCING00000005643 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000005643" - 60S ribosomal protein L18a in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING0000000564360S ribosomal protein L18a (178 aa)    
Predicted Functional Partners:
r35a
R35a protein (121 aa)
     
  0.999
ENSCING00000000723
Uncharacterized protein ; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (311 aa)
   
  0.999
ENSCING00000016900
Uncharacterized protein (148 aa)
   
  0.999
ENSCING00000012950
Uncharacterized protein (165 aa)
   
  0.999
ENSCING00000000891
Ribosomal protein (216 aa)
   
  0.999
ENSCING00000007209
Uncharacterized protein (246 aa)
     
  0.999
ENSCING00000011538
Uncharacterized protein (125 aa)
   
  0.999
ENSCING00000020198
Uncharacterized protein (133 aa)
     
  0.998
ENSCING00000018871
Uncharacterized protein (152 aa)
     
  0.998
ENSCING00000000730
Uncharacterized protein (246 aa)
     
  0.998
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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