Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
F6Y178_CIOINAmino acid transporter. (499 aa)    
Predicted Functional Partners:
F6U1B1_CIOIN
Amino acid transporter.
  
 
 
0.911
LOC100183879
Amino acid transporter.
  
  
 
0.901
F6UJ45_CIOIN
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.460
LOC100185923
Aamy domain-containing protein.
   
 
 0.452
F6TSN4_CIOIN
Uncharacterized protein.
     
 0.417
H2Y2K4_CIOIN
3-hydroxy-3-methylglutaryl coenzyme A reductase.
     
 0.409
F6Q909_CIOIN
Uncharacterized protein.
     
 0.408
LOC445704
TC10 protein.
    
 0.405
F6ZTE7_CIOIN
Uncharacterized protein.
     
  0.405
F6VUM2_CIOIN
Glutamine synthetase.
   
  
 0.404
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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