Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100180869Uncharacterized protein. (560 aa)    
Predicted Functional Partners:
F6W833_CIOIN
Uncharacterized protein.
  
  
 
0.901
F7A2X8_CIOIN
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
  
  
 0.631
F6WNN3_CIOIN
OMPdecase domain-containing protein.
  
  
 0.497
H2XYW4_CIOIN
Uncharacterized protein.
  
  
 0.457
LOC100184252
Vesicle transport protein GOT1B.
  
  
 0.457
F6TIR0_CIOIN
Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.
  
  
 0.448
F6UA87_CIOIN
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
  
 0.448
F6PKA8_CIOIN
Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
  
 0.437
F6PHI9_CIOIN
CPSase_sm_chain domain-containing protein.
  
  
 0.437
F6PHH7_CIOIN
ATP-grasp domain-containing protein.
  
  
 0.437
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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