STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnal1Dynein light chain 1, axonemal; Part of the multisubunit axonemal ATPase complexes that generate the force for cilia motility and govern beat frequency (By similarity). Component of the outer arm dynein (ODA). May be involved in a mechanosensory feedback mechanism controlling ODA activity based on external conformational cues by tethering the outer arm dynein heavy chain (DNAH5) to the microtubule within the axoneme (By similarity). (190 aa)    
Predicted Functional Partners:
Ic1
Uncharacterized protein.
   
 
 0.642
LOC100184708
Uncharacterized protein.
      
 0.604
ciic3
Thioredoxin domain-containing protein 3 homolog; May be required during the final stages of sperm tail maturation. May act by reducing disulfide bonds within the sperm components (By similarity).
    
 
 0.522
F6ZSD7_CIOIN
Uncharacterized protein.
    
   0.489
F6W122_CIOIN
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
   0.489
F6QGA2_CIOIN
G_PROTEIN_RECEP_F2_4 domain-containing protein.
    
   0.489
F6ZRU0_CIOIN
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
   0.489
F6VQS8_CIOIN
G_PROTEIN_RECEP_F2_4 domain-containing protein.
    
   0.489
LOC100180911
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
   0.489
H2XYA8_CIOIN
Uncharacterized protein.
    
   0.489
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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