Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cipc2P/Homo B domain-containing protein; Belongs to the peptidase S8 family. (660 aa)    
Predicted Functional Partners:
LOC100184198
Uncharacterized protein.
   
  
 0.806
F6YPN5_CIOIN
Tyrosine-protein phosphatase domain-containing protein.
   
  
 0.757
F7B9A9_CIOIN
Uncharacterized protein.
   
  
 0.732
LOC100176438
Netrin receptor UNC5B-a.
      
 0.649
LOC100182691
SAC domain-containing protein.
      
 0.646
LOC100184661
Signal peptidase complex subunit 3.
      
 0.643
F7BFT5_CIOIN
Uncharacterized protein.
      
 0.626
F6X6B7_CIOIN
Peptidase_M14 domain-containing protein.
   
  
 0.582
zf(c2h2)-41
Uncharacterized protein.
    
 0.566
neurogenin
Transcription factor protein isoform X1.
   
  
 0.528
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (26%) [HD]