Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ephrina-cEphrin RBD domain-containing protein; Belongs to the ephrin family. (264 aa)    
Predicted Functional Partners:
Ephd
Uncharacterized protein.
   
 0.740
F6QR95_CIOIN
Uncharacterized protein.
   
 0.740
Ephe
Uncharacterized protein.
   
 0.740
F6Z8I7_CIOIN
Uncharacterized protein.
    
 0.688
eph3
Uncharacterized protein.
   
 0.675
Eph-like
Uncharacterized protein.
   
 0.591
ci-arfgap-3
Zinc finger protein Ci-ArfGAP-3.
     
 0.549
F6VYU2_CIOIN
Receptor protein-tyrosine kinase.
   
 0.523
ephrina-b
Ephrin precursor; Belongs to the ephrin family.
  
  
0.502
F6VBT4_CIOIN
Uncharacterized protein.
    
 0.457
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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