STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6V7V9_CIOINSerine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (592 aa)    
Predicted Functional Partners:
LOC100186064
Serine/threonine-protein phosphatase.
    
 0.991
F6T957_CIOIN
Uncharacterized protein.
   
 0.991
H2XRC5_CIOIN
Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.
  
 
0.943
F6UTA2_CIOIN
Uncharacterized protein.
  
 
0.942
F6T283_CIOIN
Uncharacterized protein.
     
 0.935
LOC100184014
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.928
F6R0X3_CIOIN
EF-hand domain-containing protein.
     
 0.920
H2XX64_CIOIN
AB hydrolase-1 domain-containing protein.
    
 
 0.766
F6Y940_CIOIN
Serine/threonine-protein phosphatase.
   
 0.751
F6WZS8_CIOIN
Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
    
 0.690
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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