STRINGSTRING
parp4 protein (Ciona intestinalis) - STRING interaction network
"parp4" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parp4Uncharacterized protein (513 aa)    
Predicted Functional Partners:
ENSCING00000024161
Uncharacterized protein (92 aa)
     
  0.780
ENSCING00000010001
Uncharacterized protein (505 aa)
     
  0.780
ENSCING00000021898
Uncharacterized protein (133 aa)
     
  0.712
ENSCING00000014118
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (262 aa)
     
  0.669
r27a
R27a protein (155 aa)
       
  0.646
ENSCING00000005608
Uncharacterized protein (356 aa)
     
  0.640
ENSCING00000004996
Uncharacterized protein (530 aa)
     
  0.638
ENSCING00000006912
Uncharacterized protein (355 aa)
     
  0.627
swi/snf
SWI/SNF protein (1003 aa)
     
  0.613
ENSCING00000008137
Uncharacterized protein (313 aa)
     
 
  0.608
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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