STRINGSTRING
wnt-a protein (Ciona intestinalis) - STRING interaction network
"wnt-a" - Wnt signaling ligand in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wnt-aWnt signaling ligand ; Ligand for members of the frizzled family of seven transmembrane receptors (190 aa)    
Predicted Functional Partners:
fz4
Frizzled receptor (339 aa)
       
  0.863
cifrz
Frizzled receptor (866 aa)
       
  0.846
sfrp2
Secreted frizzled-related protein precursor (293 aa)
       
  0.845
sfrp1/5
Secreted frizzled-related protein precursor (365 aa)
       
  0.840
ENSCING00000009096
Uncharacterized protein (593 aa)
       
  0.838
ENSCING00000019368
Uncharacterized protein (214 aa)
       
  0.795
fz3/6
Frizzled receptor precursor (810 aa)
       
  0.795
sfrp3/4-b
Secreted frizzled-related protein precursor (148 aa)
       
  0.795
LOC778717
Frizzled receptor precursor (262 aa)
       
  0.795
ENSCING00000008310
Uncharacterized protein (240 aa)
       
  0.795
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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