STRINGSTRING
zf(c3h)-12 protein (Ciona intestinalis) - STRING interaction network
"zf(c3h)-12" - Zinc finger protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zf(c3h)-12Zinc finger protein (413 aa)    
Predicted Functional Partners:
prpf19
Uncharacterized protein (437 aa)
     
  0.992
ENSCING00000009307
Uncharacterized protein (501 aa)
     
  0.991
cdc40
Uncharacterized protein (504 aa)
     
  0.990
ENSCING00000022206
Uncharacterized protein (486 aa)
     
  0.990
ENSCING00000007995
Uncharacterized protein (779 aa)
     
  0.989
ENSCING00000001601
Uncharacterized protein (144 aa)
     
  0.989
ENSCING00000002709
Uncharacterized protein (686 aa)
     
  0.987
ENSCING00000006985
Uncharacterized protein (852 aa)
     
  0.984
ENSCING00000008407
Uncharacterized protein (534 aa)
     
  0.982
ENSCING00000013363
Uncharacterized protein (227 aa)
     
  0.981
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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