STRINGSTRING
ugdh protein (Ciona intestinalis) - STRING interaction network
"ugdh" - UDP-glucose 6-dehydrogenase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugdhUDP-glucose 6-dehydrogenase ; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate (481 aa)    
Predicted Functional Partners:
ENSCING00000024012
Uncharacterized protein (408 aa)
 
 
  0.982
ENSCING00000008132
Uncharacterized protein (359 aa)
   
 
  0.971
ENSCING00000007115
Uncharacterized protein (357 aa)
   
 
  0.971
ENSCING00000004933
Uncharacterized protein (689 aa)
   
 
  0.948
ENSCING00000016647
Galactose-1-phosphate uridylyltransferase (339 aa)
         
  0.807
ENSCING00000009737
Uncharacterized protein (186 aa)
   
 
  0.771
ENSCING00000008426
Uncharacterized protein (362 aa)
   
 
  0.723
ENSCING00000006252
Uncharacterized protein (311 aa)
   
 
  0.717
nemo-like
Nemo-Like kinase (403 aa)
       
      0.659
ENSCING00000005663
Uncharacterized protein (351 aa)
       
      0.654
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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