Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
F6ZHQ8_CIOINPhospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1125 aa)    
Predicted Functional Partners:
F6UNA3_CIOIN
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
    
 0.981
F6QH95_CIOIN
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
    
 0.981
F6WWM2_CIOIN
TMC domain-containing protein.
   
 0.841
F6RF18_CIOIN
Uncharacterized protein.
   
  
 0.839
LOC100179685
Uncharacterized protein.
   
  
 0.838
vglut
MFS domain-containing protein.
    
 
 0.838
Kcnq4/5
Uncharacterized protein.
      
 0.838
F6VBD0_CIOIN
Uncharacterized protein.
   
  
 0.824
F6R7B5_CIOIN
C2 domain-containing protein.
      
 0.736
LOC100175111
Vitrin.
      
 0.668
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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