STRINGSTRING
atp8a1 protein (Ciona intestinalis) - STRING interaction network
"atp8a1" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atp8a1Uncharacterized protein (1125 aa)    
Predicted Functional Partners:
ENSCING00000008282
Uncharacterized protein (360 aa)
     
 
  0.664
ENSCING00000011356
Uncharacterized protein (351 aa)
     
 
  0.664
ENSCING00000022592
Uncharacterized protein (158 aa)
     
 
  0.472
ENSCING00000000755
Uncharacterized protein (336 aa)
           
  0.443
gbf1
Uncharacterized protein (181 aa)
     
   
  0.427
ENSCING00000004296
Uncharacterized protein (1533 aa)
     
   
  0.427
ENSCING00000002088
Uncharacterized protein (509 aa)
     
   
  0.418
ENSCING00000014438
Uncharacterized protein (282 aa)
           
  0.405
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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