STRINGSTRING
zf(dhhc)-1 protein (Ciona intestinalis) - STRING interaction network
"zf(dhhc)-1" - Zinc finger protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zf(dhhc)-1Zinc finger protein (355 aa)    
Predicted Functional Partners:
armc4
Uncharacterized protein (1041 aa)
     
 
  0.585
ci-arm37
Radial spoke protein ARM37 (342 aa)
     
 
  0.570
ENSCING00000002710
Nitric oxide synthase ; Produces nitric oxide (NO) (1127 aa)
       
    0.541
ENSCING00000024982
Uncharacterized protein (148 aa)
     
   
  0.514
ENSCING00000012271
Uncharacterized protein (343 aa)
     
 
  0.509
ENSCING00000004115
Uncharacterized protein (477 aa)
     
 
  0.509
ENSCING00000002850
Uncharacterized protein (2241 aa)
     
   
  0.428
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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