LOC100179176 protein (Ciona intestinalis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

LOC100179176

Uncharacterized protein. (145 aa)

Predicted Functional Partners:

Rbdlc

0.825

dynlt1

0.799

LOC100187521

0.774

LOC100185458

0.719

H2XPM7_CIOIN

0.719

dynll6

0.719

LOC100185043

0.697

F7AAA1_CIOIN

0.697

F7BML6_CIOIN

0.697

LOC100183423

0.592

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F7AAA1_CIOIN	F7BML6_CIOIN	ENSCINP00000004235	ENSCINP00000008987	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.540
F7AAA1_CIOIN	H2XPM7_CIOIN	ENSCINP00000004235	ENSCINP00000031611	Uncharacterized protein.	Dynein light chain.	0.772
F7AAA1_CIOIN	LOC100179176	ENSCINP00000004235	ENSCINP00000012342	Uncharacterized protein.	Uncharacterized protein.	0.697
F7AAA1_CIOIN	LOC100183423	ENSCINP00000004235	ENSCINP00000018154	Uncharacterized protein.	Tctex1 domain-containing protein 2 isoform X1.	0.697
F7AAA1_CIOIN	LOC100185043	ENSCINP00000004235	ENSCINP00000000501	Uncharacterized protein.	Uncharacterized protein.	0.953
F7AAA1_CIOIN	LOC100185458	ENSCINP00000004235	ENSCINP00000012560	Uncharacterized protein.	Uncharacterized protein LOC100185458.	0.835
F7AAA1_CIOIN	LOC100187521	ENSCINP00000004235	ENSCINP00000022791	Uncharacterized protein.	Uncharacterized protein.	0.958
F7AAA1_CIOIN	Rbdlc	ENSCINP00000004235	ENSCINP00000031790	Uncharacterized protein.	Dynein light chain roadblock.	0.863
F7AAA1_CIOIN	dynll6	ENSCINP00000004235	ENSCINP00000035007	Uncharacterized protein.	Dynein light chain.	0.855
F7AAA1_CIOIN	dynlt1	ENSCINP00000004235	ENSCINP00000031358	Uncharacterized protein.	Tctex1-related dynein light chain.	0.787
F7BML6_CIOIN	F7AAA1_CIOIN	ENSCINP00000008987	ENSCINP00000004235	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.540
F7BML6_CIOIN	H2XPM7_CIOIN	ENSCINP00000008987	ENSCINP00000031611	WD_REPEATS_REGION domain-containing protein.	Dynein light chain.	0.772
F7BML6_CIOIN	LOC100179176	ENSCINP00000008987	ENSCINP00000012342	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.697
F7BML6_CIOIN	LOC100183423	ENSCINP00000008987	ENSCINP00000018154	WD_REPEATS_REGION domain-containing protein.	Tctex1 domain-containing protein 2 isoform X1.	0.768
F7BML6_CIOIN	LOC100185043	ENSCINP00000008987	ENSCINP00000000501	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.606
F7BML6_CIOIN	LOC100185458	ENSCINP00000008987	ENSCINP00000012560	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein LOC100185458.	0.969
F7BML6_CIOIN	LOC100187521	ENSCINP00000008987	ENSCINP00000022791	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.861
F7BML6_CIOIN	Rbdlc	ENSCINP00000008987	ENSCINP00000031790	WD_REPEATS_REGION domain-containing protein.	Dynein light chain roadblock.	0.985
F7BML6_CIOIN	dynll6	ENSCINP00000008987	ENSCINP00000035007	WD_REPEATS_REGION domain-containing protein.	Dynein light chain.	0.979
F7BML6_CIOIN	dynlt1	ENSCINP00000008987	ENSCINP00000031358	WD_REPEATS_REGION domain-containing protein.	Tctex1-related dynein light chain.	0.949