Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
LOC100183815Peroxisomal sarcosine oxidase-like isoform X3. (393 aa)    
Predicted Functional Partners:
F6SGC2_CIOIN
Uncharacterized protein.
    
   0.537
F6V1A9_CIOIN
Uncharacterized protein.
    
   0.537
F6ZFG0_CIOIN
AB hydrolase-1 domain-containing protein.
    
 0.514
F6PJS6_CIOIN
AB hydrolase-1 domain-containing protein.
    
 0.514
F6VUM2_CIOIN
Glutamine synthetase.
  
 
 0.496
F6TXQ6_CIOIN
Serine--pyruvate aminotransferase.
  
 
 0.483
LOC100176441
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
   
 
 0.471
F6V198_CIOIN
Serine--pyruvate aminotransferase.
  
 
 0.464
F7AAM4_CIOIN
Uncharacterized protein.
  
 0.457
F6X034_CIOIN
Uncharacterized protein.
    
 0.453
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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