Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
F6V5U6_CIOINCTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. (673 aa)    
Predicted Functional Partners:
ci-ndk/dm44
Radial spoke protein NDK/DM44; Belongs to the NDK family.
  
 
 0.951
F7BBQ5_CIOIN
Nucleoside diphosphate kinase.
  
 
 0.950
F6UM48_CIOIN
Uncharacterized protein.
  
 
 0.945
F6XHG6_CIOIN
Uncharacterized protein.
     
 0.906
H2XS39_CIOIN
Uncharacterized protein.
     
 0.906
F6XHJ8_CIOIN
NUC domain-containing protein.
     
  0.900
LOC100176897
Uncharacterized protein.
  
 
 0.886
F6UET6_CIOIN
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
   
 0.815
H2XRT9_CIOIN
Sulfatase domain-containing protein.
     
 0.814
F6VUM2_CIOIN
Glutamine synthetase.
  
 0.777
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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