Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
F6SG33_CIOINUncharacterized protein; Belongs to the FGGY kinase family. (567 aa)    
Predicted Functional Partners:
LOC100183886
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 0.957
F6VPX3_CIOIN
PlsC domain-containing protein.
    
 0.926
F6ZRC6_CIOIN
Aldo_ket_red domain-containing protein.
    
 0.916
LOC100176226
Aldose reductase-like.
    
 0.916
H2XUY3_CIOIN
Aldo_ket_red domain-containing protein.
    
 0.916
F6ZGJ4_CIOIN
Uncharacterized protein.
     
 0.915
F7A2Q0_CIOIN
Hydrolase_4 domain-containing protein.
    
 0.907
F6R2F1_CIOIN
Hydrolase_4 domain-containing protein.
    
 0.907
F6WNJ2_CIOIN
Uncharacterized protein.
     
  0.900
LOC100183833
Basal body-orientation factor 1-like.
   
    0.886
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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