STRINGSTRING
jarid1c protein (Ciona intestinalis) - STRING interaction network
"jarid1c" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jarid1cUncharacterized protein (1520 aa)    
Predicted Functional Partners:
ENSCING00000005480
Uncharacterized protein (589 aa)
     
  0.825
ENSCING00000022359
Histone H3 (136 aa)
       
  0.781
ENSCING00000002753
Histone H3 (136 aa)
       
  0.781
ash2-like
Ash2-like protein (352 aa)
     
  0.770
ENSCING00000013118
Uncharacterized protein (147 aa)
       
  0.761
ENSCING00000006958
Uncharacterized protein (360 aa)
     
  0.735
ENSCING00000014316
Uncharacterized protein (477 aa)
     
  0.723
ENSCING00000019847
Zinc finger protein LOC723799 (1298 aa)
     
  0.721
ENSCING00000020588
Uncharacterized protein (463 aa)
     
  0.712
ENSCING00000005629
Uncharacterized protein (620 aa)
     
  0.712
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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