STRINGSTRING
ENSCING00000006100 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000006100" - Deoxyribonuclease in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000006100Deoxyribonuclease (271 aa)    
Predicted Functional Partners:
ENSCING00000006190
Ribonuclease ; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (292 aa)
           
  0.472
ENSCING00000014183
Uncharacterized protein (204 aa)
       
      0.452
ENSCING00000007550
Uncharacterized protein (378 aa)
       
      0.406
ENSCING00000007153
Uncharacterized protein (378 aa)
       
      0.406
act
Act protein (375 aa)
       
      0.406
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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