Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100181980Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (725 aa)    
Predicted Functional Partners:
F6VR09_CIOIN
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
 0.999
LOC101242316
3-ketoacyl-CoA thiolase, mitochondrial; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.993
LOC100180056
Long-chain specific acyl-CoA dehydrogenase, mitochondrial-like isoform X3.
  
 0.988
F6U1L2_CIOIN
Uncharacterized protein.
  
 0.980
LOC100177845
acetyl-CoA acetyltransferase, mitochondrial-like; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.978
F6UHT2_CIOIN
Uncharacterized protein.
  
 0.978
LOC100186995
enoyl-CoA hydratase, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.
   
0.971
F6X4A8_CIOIN
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.964
LOC100186673
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.964
LOC100184635
Uncharacterized protein.
  
 0.962
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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