STRINGSTRING
tlx protein (Ciona intestinalis) - STRING interaction network
"tlx" - Transcription factor protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tlxTranscription factor protein (476 aa)    
Predicted Functional Partners:
lhx1
Uncharacterized protein (387 aa)
       
 
  0.611
prx1
Prx1 protein (825 aa)
       
 
0.496
gsc
Transcription factor protein (257 aa)
       
 
0.492
aristaless
Transcription factor protein (429 aa)
       
 
0.489
dmbx
Dmbx protein (240 aa)
       
 
0.486
lmx-like
Transcription factor protein (505 aa)
       
 
  0.474
lmx
Transcription factor protein (625 aa)
       
 
  0.474
frem1
Uncharacterized protein (2177 aa)
       
 
  0.452
isl
LIM homeodomain protein (402 aa)
       
 
  0.451
unc4-b
Uncharacterized protein (165 aa)
       
 
  0.449
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (7%) [HD]